Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.
MGYSSLLSFSLGFLLLFHCSFAQIEQVVNSQQRQQQQRFQTQCQIQNLNALEPKRRIESEAGVTEFWDQNEEQLQCANVAVFRHTIQSRGLLVPSYDNAPELVYVVQGSGIHGAVFPGCPETFQEESQSRSRSERSQQSGEQHQKVRPIQEGDVIALPAGVAHWIYNNGQSKLVLVALADVGNSENQLDQYLRKFVLGGSPQQEIQGSGQSRSRSQSQSSRRGQQGQQSNNILSAFDEEILAQSFNIDTQLARRLQKEKRQRGIIVRVQEDLEVLSPHRQEQEQEYEEERERRQRNGLEETFCTMTLKYNINDPSRADVYNPRGGRVSSVNALNLPILRFLQLSAKKGVLHRDAILAPHWNVNAHSIVYITRGNGRIQIVSENGESVFDEEIREGQLVVVPQNFAVVKRASSDKFEWVSFKTNGLSQTSQLAGRVSVFRALPLDVIKNSFDISREDARRLKESRSETTIFAPGSSSQRKSQSERERQREREEREIH
MGYSSLLSFSLGFLLLFHCSFAQIEQVVNSQQRQQQQRFQTQCQIQNLNALEPKRRIESEAGVTEFWDQNEEQLQCANVAVFRHTIQSRGLLVPSYNNAPELVYVVQGSGIHGAVFPGCPETFQEESQSQSRSQHSRSERSQQSGEQHQKVRHIREGDIIALPAGVAHWIYNNGQSKLVLVALADVGNSENQLDQYLRKFVLGGSPQQEIQGGGQSWSQSRSSRKGQQSNNILSAFDEEILAQSFNIDTQLVKKLQREEKQRGIIVRVKEDLQVLSPQRQEKEYSDNGLEETFCTMTLKLNINDPSRADVYNPRGGRVTSINALNLPILRFLQLSVEKGVLYQNAIMAPHWNMNAHSIVYITRGNGRMQIVSENGESVFDEEIREGQLVVVPQNFAVVKRASSDGFEWVSFKTNGLAKISQLAGRISVMRGLPLDVIQNSFDISREDAWNLKESRSEMTIFAPGSRSQRQRN
None.
Species containing the peptide SQSQSSR are presented below. Accessions and taxid values link to further information hosted on NCBI.
| Species name | Common name | Accession(s) | Tax ID |
|---|---|---|---|
| Coffea canephora | Coffea canephora | CDP09830 |
49390 |
| Colletotrichum gloeosporioides Cg-14 | Colletotrichum gloeosporioides cg-14 | EQB46753 |
1237896 |
| Colletotrichum gloeosporioides Nara gc5 | Colletotrichum gloeosporioides nara gc5 | XP_007280701 |
1213859 |
| Kwoniella heveanensis BCC8398 | Kwoniella heveanensis bcc8398 | OCF34263 |
1296120 |
| Cryptococcus gattii EJB2 | Cryptococcus gattii ejb2 | XP_003197434 |
1296103 |
| Kwoniella heveanensis CBS 569 | Kwoniella heveanensis cbs 569 | OCF43722 |
1296119 |
| Plasmodium vivax | Malaria parasite p. vivax | XP_001616425 |
5855 |
| Plasmodium vivax Brazil I | Plasmodium vivax brazil i | KMZ85929 |
1033975 |
| Plasmodium vivax India VII | Plasmodium vivax india vii | KMZ79634 |
1077284 |
| Cryptococcus bestiolae CBS 10118 | Cryptococcus bestiolae cbs 10118 | OCF25876 |
1296100 |
| Cryptococcus gattii IND107 | Cryptococcus gattii ind107 | KIR84389 |
1296105 |
| Chaetomium thermophilum var. thermophilum DSM 1495 | Chaetomium thermophilum var. thermophilum dsm 1495 | XP_006696814 |
759272 |
| Cicer arietinum | Chickpea | XP_012570623 |
3827 |
| Citrus sinensis | Sweet orange | XP_015387316 |
2711 |
| Cryptococcus gattii LA55 | Cryptococcus gattii la55 | KGB79292 |
1296106 |
| Cryptococcus gattii 2001/935-1 | Cryptococcus gattii 2001/935-1 | KGB79292 |
1334442 |
| Cryptococcus gattii 99/473 | Cryptococcus gattii 99/473 | KIR38559 |
1296104 |
| Cryptococcus gattii CA1014 | Cryptococcus gattii ca1014 | KGB79292 |
1296107 |
| Cryptococcus gattii CBS 10090 | Cryptococcus gattii cbs 10090 | KGB79292 |
1296101 |
| Cryptococcus gattii E566 | Cryptococcus gattii e566 | XP_003197434 |
1296102 |
| Acanthamoeba castellanii str. Neff | Acanthamoeba castellanii str. neff | XP_004336411 |
1257118 |
| Ajellomyces capsulatus G186AR | Ajellomyces capsulatus g186ar | EEH04634 |
447093 |
| Albugo candida | Albugo candida | CCI45943 |
65357 |
| Ancylostoma ceylanicum | Ancylostoma ceylanicum | EYC08681 |
53326 |
| Arabis alpina | Gray rockcress | KFK28795 |
50452 |
| Aspergillus clavatus NRRL 1 | Aspergillus clavatus nrrl 1 | XP_001274255 |
344612 |
| Aspergillus nidulans FGSC A4 | Aspergillus nidulans fgsc a4 | XP_664677 |
227321 |
| Austrofundulus limnaeus | Austrofundulus limnaeus | XP_013860684 |
52670 |
| Bombus impatiens | Common eastern bumble bee | XP_012248987 XP_012248986 |
132113 |
| Bombus terrestris | Buff-tailed bumblebee | XP_003396802 XP_003393804 XP_012174811 |
30195 |
| Brachypodium distachyon | Brachypodium distachyon | XP_010232629 XP_003564741 |
15368 |
| Camponotus floridanus | Florida carpenter ant | EFN66262 XP_011259406 |
104421 |
| Candida tanzawaensis NRRL Y-17324 | Candida tanzawaensis nrrl y-17324 | ODV77824 |
984487 |
| Canis lupus familiaris | Dog | XP_532133 |
9615 |
| Capronia coronata CBS 617.96 | Capronia coronata cbs 617.96 | XP_007722528 |
1182541 |
| Ceratocystis radicicola | Ceratocystis radicicola | KKA29070 |
72032 |
| Crassostrea gigas | Pacific oyster | EKC30895 XP_011443356 |
29159 |
| Cricetulus griseus | Chinese hamster | ERE68459 XP_007631932 XP_003511381 |
10029 |
| Cryptococcus gattii MMRL2647 | Cryptococcus gattii mmrl2647 | KGB79292 |
1296117 |
| Cryptococcus gattii NT-10 | Cryptococcus gattii nt-10 | XP_003197434 |
1296108 |
| Cryptococcus gattii R265 | Cryptococcus gattii r265 | KGB79292 |
294750 |
| Cryptococcus gattii Ram5 | Cryptococcus gattii ram5 | KIR38559 |
1296110 |
| Cryptococcus gattii Ru294 | Cryptococcus gattii ru294 | XP_003197434 |
1296112 |
| Cryptococcus gattii WM276 | Cryptococcus gattii wm276 | XP_003197434 |
367775 |
| Cynara cardunculus var. scolymus | Cynara cardunculus var. scolymus | KVI07592 KVI07592 |
59895 |
| Cyphellophora europaea CBS 101466 | Cyphellophora europaea cbs 101466 | XP_008717166 |
1220924 |
| Cyprinodon variegatus | Cyprinodon variegatus | XP_015240344 |
28743 |
| Diachasma alloeum | Diachasma alloeum | XP_015113217 |
454923 |
| Drosophila arizonae | Drosophila arizonae | XP_017870792 XP_017870790 XP_017870789 |
7263 |
| Drosophila busckii | Drosophila busckii | XP_017852074 ALC49954 |
30019 |
| Drosophila erecta | Drosophila erecta | XP_001982749 |
7220 |
| Drosophila mojavensis | Drosophila mojavensis | XP_002009753 |
7230 |
| Drosophila rhopaloa | Drosophila rhopaloa | XP_016985197 |
1041015 |
| Drosophila virilis | Drosophila virilis | XP_002059401 |
7244 |
| Drosophila willistoni | Drosophila willistoni | XP_002071208 |
7260 |
| Eucalyptus grandis | Eucalyptus grandis | KCW62510 XP_010059580 |
71139 |
| Eufriesea mexicana | Eufriesea mexicana | XP_017766367 |
516756 |
| Fusarium oxysporum FOSC 3-a | Fusarium oxysporum fosc 3-a | EWY79577 |
909455 |
| Glarea lozoyensis ATCC 20868 | Glarea lozoyensis atcc 20868 | XP_008087150 |
1116229 |
| Gloeophyllum trabeum ATCC 11539 | Gloeophyllum trabeum atcc 11539 | XP_007869771 |
670483 |
| Gonapodya prolifera JEL478 | Gonapodya prolifera jel478 | KXS12363 |
1344416 |
| Jaculus jaculus | Lesser egyptian jerboa | XP_004655454 XP_004655453 |
51337 |
| Kryptolebias marmoratus | Mangrove rivulus | AEI73144 XP_017284455 |
37003 |
| Larimichthys crocea | Large yellow croaker | XP_010727958 KKF32345 |
215358 |
| Lasius niger | Lasius niger | KMQ92598 |
67767 |
| Lepisosteus oculatus | Spotted gar | XP_015221879 XP_015221878 |
7918 |
| Leptosomus discolor | Leptosomus discolor | XP_009957211 |
188344 |
| Magnaporthe poae ATCC 64411 | Magnaporthe poae atcc 64411 | KLU81931 |
644358 |
| Manihot esculenta | Cassava | OAY50781 OAY50782 OAY50780 OAY50778 OAY50783 OAY50779 OAY50784 |
3983 |
| Medicago truncatula | Barrel medic | XP_013466451 XP_013466452 |
3880 |
| Pseudogymnoascus pannorum VKM F-4516 (FW-969) | Pseudogymnoascus pannorum vkm f-4516 (fw-969) | KFY41583 |
1420910 |
| Pyrenochaeta sp. DS3sAY3a | Pyrenochaeta sp. ds3say3a | OAL54883 |
765867 |
| Megachile rotundata | Alfalfa leafcutting bee | XP_012143109 XP_012136703 XP_012136702 XP_012136701 XP_012136700 |
143995 |
| Mesocricetus auratus | Golden hamster | XP_005087427 XP_012981660 |
10036 |
| Microtus ochrogaster | Prairie vole | XP_005368267 XP_005368266 |
79684 |
| Moniliophthora roreri | Moniliophthora roreri | KTB35497 |
221103 |
| Moniliophthora roreri MCA 2997 | Moniliophthora roreri mca 2997 | XP_007842737 |
1381753 |
| Mortierella verticillata NRRL 6337 | Mortierella verticillata nrrl 6337 | KFH64149 |
1069443 |
| Mus musculus | House mouse | NP_032496 NP_001300887 AAG38013 AAG38012 |
10090 |
| Nannospalax galili | Upper galilee mountains blind mole rat | XP_008833464 |
1026970 |
| Neotoma lepida | Desert woodrat | OBS65256 |
56216 |
| Nicotiana sylvestris | Wood tobacco | XP_009773910 |
4096 |
| Nicotiana tabacum | Common tobacco | XP_016473393 |
4097 |
| Oncopeltus fasciatus | Milkweed bug | ABN54458 |
7536 |
| Oreochromis niloticus | Nile tilapia | XP_005464776 XP_003448283 |
8128 |
| Orycteropus afer afer | Orycteropus afer afer | XP_007945228 |
1230840 |
| Oryctolagus cuniculus | Rabbit | XP_002719203 |
9986 |
| Oryzias latipes | Japanese medaka | XP_004075457 |
8090 |
| Parasitella parasitica | Parasitella parasitica | CEP17039 |
35722 |
| Penicillium griseofulvum | Penicillium griseofulvum | KXG46125 |
5078 |
| Penicillium nordicum | Penicillium nordicum | KOS42854 |
229535 |
| Peromyscus maniculatus bairdii | Prairie deer mouse | XP_006992931 XP_006992930 |
230844 |
| Phaeodactylum tricornutum CCAP 1055/1 | Phaeodactylum tricornutum ccap 1055/1 | XP_002185198 |
556484 |
| Phanerochaete carnosa HHB-10118-sp | Phanerochaete carnosa hhb-10118-sp | XP_007396887 |
650164 |
| Phytophthora infestans | Potato late blight agent | CAI72305 |
4787 |
| Picea sitchensis | Sitka spruce | ABK26738 |
3332 |
| Piriformospora indica DSM 11827 | Piriformospora indica dsm 11827 | CCA70300 |
1109443 |
| Pistacia vera | Pistacia vera | ABG73109 |
55513 |
| Plasmodium vivax Mauritania I | Plasmodium vivax mauritania i | KMZ85929 |
1035515 |
| Plasmodium vivax North Korean | Plasmodium vivax north korean | KMZ79634 |
1035514 |
| Plasmodium vivax Sal-1 | Plasmodium vivax sal-1 | XP_001616425 |
126793 |
| Polysphondylium pallidum PN500 | Polysphondylium pallidum pn500 | EFA85661 |
670386 |
| Pristionchus pacificus | Pristionchus pacificus | KKA67412 |
54126 |
| Pseudogymnoascus pannorum VKM F-3557 | Pseudogymnoascus pannorum vkm f-3557 | KFX95245 |
1437433 |
| Pseudogymnoascus pannorum VKM F-3808 | Pseudogymnoascus pannorum vkm f-3808 | KFX90602 |
1391699 |
| Pseudogymnoascus pannorum VKM F-4246 | Pseudogymnoascus pannorum vkm f-4246 | KFY08322 |
1420902 |
| Pseudogymnoascus pannorum VKM F-4513 (FW-928) | Pseudogymnoascus pannorum vkm f-4513 (fw-928) | KFY47373 |
1420907 |
| Pseudogymnoascus pannorum VKM F-4514 (FW-929) | Pseudogymnoascus pannorum vkm f-4514 (fw-929) | KFY41583 |
1420908 |
| Reticulomyxa filosa | Reticulomyxa filosa | ETO26031 |
46433 |
| Rhizoctonia solani AG-1 IA | Rhizoctonia solani ag-1 ia | ELU44444 |
983506 |
| Rhizoctonia solani AG-1 IB | Rhizoctonia solani ag-1 ib | CEL52143 CCO26306 |
1108050 |
| Salmo salar | Atlantic salmon | XP_014067061 XP_014067060 |
8030 |
| Sclerotinia borealis F-4157 | Sclerotinia borealis f-4157 | ESZ97515 |
1432307 |
| Serpula lacrymans var. lacrymans S7.3 | Serpula lacrymans var. lacrymans s7.3 | EGN98528 |
936435 |
| Serpula lacrymans var. lacrymans S7.9 | Serpula lacrymans var. lacrymans s7.9 | XP_007319861 |
578457 |
| Sorghum bicolor | Sorghum | XP_002463261 |
4558 |
| Sporisorium scitamineum | Sporisorium scitamineum | CDW98133 |
49012 |
| Stachybotrys chartarum IBT 40288 | Stachybotrys chartarum ibt 40288 | KFA70830 |
1283842 |
| Stachybotrys chartarum IBT 40293 | Stachybotrys chartarum ibt 40293 | KFA52637 |
1280524 |
| Stachybotrys chartarum IBT 7711 | Stachybotrys chartarum ibt 7711 | KEY67821 |
1280523 |
| Stachybotrys chlorohalonata IBT 40285 | Stachybotrys chlorohalonata ibt 40285 | KFA65700 |
1283841 |
| Stegastes partitus | Bicolor damselfish | XP_008289875 XP_008285231 XP_008285230 XP_008295089 |
144197 |
| Thalassiosira oceanica | Thalassiosira oceanica | EJK50597 |
159749 |
| Theobroma cacao | Cacao | XP_007036100 EOY20601 |
3641 |
| Tilletia caries | Wheat bunt fungus | OAJ15179 OAI98169 |
13290 |
| Tilletia controversa | Dwarf bunt fungus | OAJ08475 OAJ19303 |
13291 |
| Torrubiella hemipterigena | Torrubiella hemipterigena | CEJ85063 |
1531966 |
| Ziziphus jujuba | Ziziphus jujuba | XP_015901199 |
326968 |
BLAST non-redundant protein database version: 4, date: December 9, 2015.
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