Soy Protein Gly m 6 - Allergen Peptide Browser

If you found this site useful, please cite:

Croote, D., Quake, S.R. Food allergen detection by mass spectrometry: the role of systems biology. npj Syst Biol Appl. 2016 Sep 29; 2:16022.

Soy Protein: Gly m 6 | Glycinin (Legumin, 11S Globulin)

Cart: 0

Isoform:

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 495 amino acids

MAKLVFSLCFLLFSGCCFAFSSREQPQQNECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGGLSVIKPPTDEQQQRPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQESQKRAVA

UniProt: P04776 IUIS: Gly m 6

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 485 amino acids

MAKLVLSLCFLLFSGCFALREQAQQNECQIQKLNALKPDNRIESEGGFIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGNGIFGMIFPGCPSTYQEPQESQQRGRSQRPQDRHQKVHRFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQQQQGGSQSQKGKQQEEENEGSNILSGFAPEFLKEAFGVNMQIVRNLQGENEEEDSGAIVTVKGGLRVTAPAMRKPQQEEDDDDEEEQPQCVETDKGCQRQSKRSRNGIDETICTMRLRQNIGQNSSPDIYNPQAGSITTATSLDFPALWLLKLSAQYGSLRKNAMFVPHYTLNANSIIYALNGRALVQVVNCNGERVFDGELQEGGVLIVPQNFAVAAKSQSDNFEYVSFKTNDRPSIGNLAGANSLLNALPEEVIQHTFNLKSQQARQVKNNNPFSFLVPPQESQRRAVA

UniProt: P04405 IUIS: Gly m 6

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 481 amino acids

MAKLVLSLCFLLFSGCCFAFSFREQPQQNECQIQRLNALKPDNRIESEGGFIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNAPQEIYIQQGSGIFGMIFPGCPSTFEEPQQKGQSSRPQDRHQKIYHFREGDLIAVPTGFAYWMYNNEDTPVVAVSLIDTNSFQNQLDQMPRRFYLAGNQEQEFLQYQPQKQQGGTQSQKGKRQQEEENEGGSILSGFAPEFLEHAFVVDRQIVRKLQGENEEEEKGAIVTVKGGLSVISPPTEEQQQRPEEEEKPDCDEKDKHCQSQSRNGIDETICTMRLRHNIGQTSSPDIFNPQAGSITTATSLDFPALSWLKLSAQFGSLRKNAMFVPHYNLNANSIIYALNGRALVQVVNCNGERVFDGELQEGQVLIVPQNFAVAARSQSDNFEYVSFKTNDRPSIGNLAGANSLLNALPEEVIQQTFNLRRQQARQVKNNNPFSFLVPPKESQRRVVA

UniProt: P11828 IUIS: Gly m 6

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 563 amino acids

MGKPFTLSLSSLCLLLLSSACFAISSSKLNECQLNNLNALEPDHRVESEGGLIQTWNSQHPELKCAGVTVSKLTLNRNGLHLPSYSPYPRMIIIAQGKGALGVAIPGCPETFEEPQEQSNRRGSRSQKQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQTPRVFYLAGNPDIEYPETMQQQQQQKSHGGRKQGQHQQEEEEEGGSVLSGFSKHFLAQSFNTNEDIAEKLQSPDDERKQIVTVEGGLSVISPKWQEQQDEDEDEDEDDEDEQIPSHPPRRPSHGKREQDEDEDEDEDKPRPSRPSQGKREQDQDQDEDEDEDEDQPRKSREWRSKKTQPRRPRQEEPRERGCETRNGVEENICTLKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFQLSAQYVVLYKNGIYSPHWNLNANSVIYVTRGQGKVRVVNCQGNAVFDGELRRGQLLVVPQNFVVAEQAGEQGFEYIVFKTHHNAVTSYLKDVFRAIPSEVLAHSYNLRQSQVSELKYEGNWGPLVNPESQQGSPRVKVA

UniProt: Q9SB11 IUIS: Gly m 6

Empirical Proteotypic Peptide Explorer:

This rose plot enables visualization of proteotypic peptides. Each colored rose petal corresponds to a peptide and is bounded by thin gray petals, which represent tryptic cut sites. The radial magnitude of each peptide corresponds to the number of publications which report it.

Hover over a rose petal with your mouse to see the peptide. Click on a rose petal to see the species specificity of that peptide and add it to your cart.

Sequence - 517 amino acids

MGKPFFTLSLSSLCLLLLSSACFAITSSKFNECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSHGGRKQGQHQQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEGGLSVISPKWQEQEDEDEDEDEEYEQTPSYPPRRPSHGKHEDDEDEDEEEDQPRPDHPPQRPSRPEQQEPRGRGCQTRNGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRAIPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP

UniProt: Q7GC77 IUIS: Gly m 6

Peptide Selector Tool

Explore peptide targets for mass spectrometry by adjusting the selection criteria below. Results from empirical and computational prediction tools have been aggregated for convenience.

Exclude:

Cysteine

Methionine

NXS / NXT

RP / KP

RR / KK / KR / RK

Nonspecific

Peptide Characteristics:

Minimum length:

Maximum length:

Search:

1	Peptide	2	Exp.³	ESP⁴	CONSeQ⁵
R	VFDGELQEGR	V	9	0.538	0.736
R	VLIVPQNFVVAAR	S	8	0.641	0.2974
R	SQSDNFEYVSFK	T	8	0.626	0.4661
K	EAFGVNMQIVR	N	8	0.482	0.42222
K	SQSDNFEYVSFK	T	8	0.626	0.4661
R	SQSDNFEYVSFK	T	8	0.626	0.4661
R	LSAEFGSLR	K	7	0.476	0.66494
R	ISTLNSLTLPALR	Q	6	0.629	0.59184
R	ISTLNSLTLPALR	Q	6	0.629	0.59184
K	GIFGMIYPGCPSTFEEPQQPQQR	G	5	0.823	0.2694
R	FYLAGNQEQEFLK	Y	5	0.605	0.37508
K	HQQEEENEGGSILSGFTLEFLEHAFSVDK	Q	5	0.481	0.15014
R	FYLAGNQEQEFLK	Y	5	0.605	0.37508
R	AIPSEVLAHSYNLR	Q	5	0.695	0.69544
R	RPSYTNGPQEIYIQQGK	G	4	0.383	0.39378
K	QQEEENEGSNILSGFAPEFLK	E	4	0.715	0.33498
R	NLQGENEEEDSGAIVTVK	G	4	0.698	0.6282
K	NAMFVPHYTLNANSIIYALNGR	A	4	0.504	0.05638
R	VFDGELQEGGVLIVPQNFAVAAK	S	4	0.654	0.04414
R	QQEEENEGGSILSGFAPEFLEHAFVVDR	Q	4	0.563	0.1525
K	LSAQFGSLR	K	4	0.464	0.67048
R	VESEGGLIQTWNSQHPELK	C	4	0.717	0.35252
R	VFYLAGNPDIEYPETMQQQQQQK	S	4	0.699	0.29392
K	HFLAQSFNTNEDIAEK	L	4	0.753	0.39634
K	QIVTVEGGLSVISPK	W	4	0.766	0.92768
K	YEGNWGPLVNPESQQGSPR	V	4	0.819	0.5185
K	QIVTVEGGLSVISPK	W	4	0.766	0.92768
R	EQPQQNECQIQK	L	3	0.331	0.38698
K	LNALKPDNR	I	3	0.232	0.39334
R	IESEGGLIETWNPNNKPFQCAGVALSR	C	3	0.457	0.16818
K	YQQEQGGHQSQK	G	3	0.36	0.22192
K	NLQGENEGEDK	G	3	0.337	0.13854
K	NAMFVPHYNLNANSIIYALNGR	A	3	0.516	0.07818
R	ALIQVVNCNGER	V	3	0.615	0.6837
K	LNALKPDNR	I	3	0.232	0.39334
K	LSAQYGSLR	K	3	0.394	0.6995
R	LNALKPDNR	I	3	0.232	0.39334
R	FYLAGNQEQEFLQYQPQK	Q	3	0.644	0.26782
K	NAMFVPHYNLNANSIIYALNGR	A	3	0.516	0.07818
K	CAGVTVSK	L	3	0.242	0.32188
R	NGLHLPSYSPYPR	M	3	0.684	0.35168
R	MIIIAQGK	G	3	0.231	0.3763
K	WQEQQDEDEDEDEDDEDEQIPSHPPR	R	3	0.478	0.31158
R	ADFYNPK	A	3	0.23	0.33692
R	QFQLSAQYVVLYK	N	3	0.406	0.28524
K	NGIYSPHWNLNANSVIYVTR	G	3	0.495	0.13076
R	VVNCQGNAVFDGELR	R	3	0.565	0.6076
R	GQLLVVPQNFVVAEQAGEQGFEYIVFK	T	3	0.368	0.04948
K	THHNAVTSYLK	D	3	0.507	0.16722
K	GAIGFAFPGCPETFEKPQQQSSR	R	3	0.623	0.46682
R	SQQQLQDSHQK	I	3	0.306	0.2469
R	VFYLAGNPDIEHPETMQQQQQQK	S	3	0.647	0.37258
K	HFLAQSFNTNEDTAEK	L	3	0.729	0.50976
R	ADFYNPK	A	3	0.23	0.33692
R	QFGLSAQYVVLYR	N	3	0.398	0.22462
R	NGIYSPHWNLNANSVIYVTR	G	3	0.495	0.13076
R	VVNCQGNAVFDGELR	R	3	0.565	0.6076
R	EQAQQNECQIQK	L	2	0.321	0.4056
K	YQQQQQGGSQSQK	G	2	0.376	0.29032
R	KPQQEEDDDDEEEQPQCVETDK	G	2	0.654	0.29266
R	ALVQVVNCNGER	V	2	0.574	0.68858
K	NNNPFSFLVPPQESQR	R	2	0.864	0.56882
R	EQPQQNECQIQR	L	2	0.367	0.36888
R	ALVQVVNCNGER	V	2	0.574	0.68858
K	NNNPFSFLVPPK	E	2	0.767	0.53518
K	LNECQLNNLNALEPDHR	V	2	0.63	0.39096
K	QGQHQQEEEEEGGSVLSGFSK	H	2	0.618	0.4692
K	LQSPDDER	K	2	0.225	0.13154
R	EQDQDQDEDEDEDEDQPR	K	2	0.584	0.2822
R	QSQVSELK	Y	2	0.235	0.38848
K	FNECQLNNLNALEPDHR	V	2	0.622	0.33638
R	VESEGGLIETWNSQHPELQCAGVTVSK	R	2	0.578	0.21822
R	NGLHLPSYSPYPQMIIVVQGK	G	2	0.664	0.17478
K	QGQHQQQEEEGGSVLSGFSK	H	2	0.606	0.48408
K	WQEQEDEDEDEDEEYEQTPSYPPR	R	2	0.475	0.318
K	THHNAVSSYIK	D	2	0.536	0.1664
K	GAIVTVK	G	1	0.22	0.53132
K	FLVPPQESQK	R	1	0.473	0.68128
R	IESEGGFIETWNPNNKPFQCAGVALSR	C	1	0.384	0.14994
R	IESEGGFIETWNPNNKPFQCAGVALSR	C	1	0.384	0.14994
K	GAIVTVK	G	1	0.22	0.53132
R	VFDGELQEGQVLIVPQNFAVAAR	S	1	0.608	0.03558
R	NGVEENICTLK	L	1	0.485	0.56692
R	NGVEENICTMK	L	1	0.324	0.30844
R	GQLLVVPQNFVVAEQGGEQGLEYVVFK	T	1	0.424	0.0625
R	AIPSEVLSNSYNLGQSQVR	Q	1	0.678	0.19406
K	YQGNSGPLVNP	$	1	0.444	0.47664
K	LVFSLCFLLFSGCCFAFSSR	E	0	0.199	0.10232
R	GQSSRPQDR	H	0	0.227	0.1055
R	NGIDETICTMR	L	0	0.399	0.30478
K	LVLSLCFLLFSGCFALR	E	0	0.186	0.14108
R	SQRPQDR	H	0	0.211	0.1078
R	VTAPAMR	K	0	0.245	0.23516
R	NGIDETICTMR	L	0	0.399	0.30478
K	LVLSLCFLLFSGCCFAFSFR	E	0	0.15	0.11016
K	GQSSRPQDR	H	0	0.227	0.1055
K	QQGGTQSQK	G	0	0.261	0.16086
K	LQGENEEEEK	G	0	0.248	0.21202
K	GGLSVISPPTEEQQQRPEEEEKPDCDEK	D	0	0.622	0.37682
K	HCQSQSR	N	0	0.165	0.07498
R	NGIDETICTMR	L	0	0.399	0.30478
^	MGKPFTLSLSSLCLLLLSSACFAISSSK	L	0	0.209	0.0828
K	GALGVAIPGCPETFEEPQEQSNR	R	0	0.861	0.50626
K	QQLQDSHQK	I	0	0.236	0.24112
R	EQDEDEDEDEDKPRPSRPSQGK	R	0	0.317	0.24334
K	LHENIARPSR	A	0	0.217	0.28564
^	MGKPFFTLSLSSLCLLLLSSACFAITSSK	F	0	0.219	0.06612
K	LHENIARPSR	A	0	0.217	0.28564

¹ Previous amino acid (^ = Start of protein)

² Next amino acid ($ = End of protein)

³ Exp. = Number of publications in which this peptide has been reported experimentally

⁴ ESP = ESP Predictor. Fusaro VA, et al. Nat Botechnol 2009; 27(2): 190-198. doi

⁵ CONSeQ = CONSeQuence. Eyers CE, et al. Mol Cell Proteomics 2011; 10(11). doi

Underline: Peptide occurs within the first 20 amino acids from the start of the protein. Use caution as the protein may contain a cleaved signaling sequence.

Strike-through: Peptide is present in a protein from another allergen species and is thus nonspecific.